Seaquest-Infotel
notes on the training
Notes, ideas, on-the-go outcomes of the training
DAY 1: Monday, 18 November, Introduction to Linux and HPC
todo list
DAY 3: Wednesday, 20 November, Using THREDDS and RAMADDA
DAY 4: Thursday, 21 November, RegCM Tutorial
DAY 5: Friday, 22 November, West-Africa Simulation and HPC Maintenance
Sysadmin sessions and hands-on
Storage & filesystem topics
Installation procedures
Software management
Climate Data
What is Climate Science
Datasets
The Format and the Conventions
netCDF data format
CF Conventions
Distributing Climate Data
Model Climate Data
Exercices on netcdf/cdo and nco
netcdf programs
nco basic tutorial
cdo command
Regional Climate Modeling
What is a Regional Model
The RegCM history
The Model Code
Compiling and Installing the Model
The datasets needed to run a simulation
The configuration of the model: the namelist file
Pre-Processing phase: Static data, SST and ICBC
Model run in MPI environment
The output data: first look
Running the RegCM 0ver a West African Domain
Geolocate the model
Setup the Physical parametrization
Run a year of simulation
Analize and visualize results
How to install Ncview: a NetCDF visual browser
Installing Torque/Maui and parallel software
Installing torque-4.2.6
MAUI
Must Have
Torque & Maui list of command
A few command to submit jobs
A Simple script
Hands-on: Installing Netcdf/NCO/CDO tools and RegCM
Module loading
Upgrading gcc/gfortran suite on centos6.4
netcdf library
Open MPI
installing cdo:
installing nco:
installing RegCM:
Advanced exercise on nco/cdo operators
nco and OPeNDAP protocol
Environment Modules
Useful module commands
Filtering procedures for DATA
RAMADDA and THREDDS install
Installing RAMADDA
RAMADDA CONFIGURATION
RAMADDA usage
Installing THREDDS
THREDDS usage
IDV tutorial
IDV download and installation
IDV usage
RAID Controller - Command Line Interface
INTEL compilation
HDF installation
NetCDF installation
Netcdf fortran
OPENMPI
RegCM4 compilation
On-the-go notes on the training
Workflow and network in ACMAD project
TODO LIST
install R on CentOS 6.4
First install epel
then run YUM
The R Manuals
Example
Precis Install notes
RegCM DATA SET table
DOMAIN datasets
SST datasets
GMC datasets
Seaquest-Infotel
Docs
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Welcome to Seaquest-Infotel’s documentation!
Welcome to Seaquest-Infotel’s documentation!
¶
Contents:
notes on the training
Sysadmin sessions and hands-on
Storage & filesystem topics
Installation procedures
Software management
Climate Data
What is Climate Science
Datasets
The Format and the Conventions
netCDF data format
CF Conventions
Distributing Climate Data
Model Climate Data
Exercices on netcdf/cdo and nco
netcdf programs
nco basic tutorial
cdo command
Regional Climate Modeling
What is a Regional Model
The RegCM history
The Model Code
Compiling and Installing the Model
The datasets needed to run a simulation
The configuration of the model: the namelist file
Pre-Processing phase: Static data, SST and ICBC
Model run in MPI environment
The output data: first look
Running the RegCM 0ver a West African Domain
Geolocate the model
Setup the Physical parametrization
Run a year of simulation
Analize and visualize results
How to install Ncview: a NetCDF visual browser
Installing Torque/Maui and parallel software
Installing torque-4.2.6
MAUI
Must Have
Torque & Maui list of command
A few command to submit jobs
A Simple script
Installing Netcdf/NCO/CDO/RegCM tools
Module loading
Upgrading gcc/gfortran suite on centos6.4
netcdf library
Open MPI
installing cdo:
installing nco:
Other packages:
Advanced exercise on nco/cdo operators
nco and OPeNDAP protocol
Environment Modules
Useful module commands
Filtering procedures for DATA
RAMADDA and THREDDS install
Installing RAMADDA
RAMADDA CONFIGURATION
RAMADDA usage
Installing THREDDS
THREDDS usage
IDV tutorial
IDV download and installation
IDV usage
RAID Controller - Command Line Interface
INTEL compilation
HDF installation
NetCDF installation
Netcdf fortran
OPENMPI
RegCM4 compilation
install R on CentOS 6.4
First install epel
then run YUM
The R Manuals
Example
On-the-go notes on the training
Workflow and network in ACMAD project
TODO LIST
Precis Install notes
RegCM DATA SET table
DOMAIN datasets
SST datasets
GMC datasets
Indices and tables
¶
Index
Module Index
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